Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 AC060834.1-201ENST00000443027 2032 ntBASIC17.49■□□□□ 0.39
HOXA2O43364 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA2O43364 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
HOXA2O43364 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA2O43364 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HOXA2O43364 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA2O43364 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
HOXA2O43364 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA2O43364 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA2O43364 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.49■□□□□ 0.39
HOXA2O43364 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA2O43364 AC008494.3-201ENST00000606615 944 ntBASIC17.49■□□□□ 0.39
HOXA2O43364 AC007431.3-201ENST00000623221 587 ntBASIC17.49■□□□□ 0.39
HOXA2O43364 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 AL603756.1-201ENST00000606511 2163 ntBASIC17.49■□□□□ 0.39
HOXA2O43364 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HOXA2O43364 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.48■□□□□ 0.39
HOXA2O43364 AC005622.1-201ENST00000636801 1703 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HOXA2O43364 AL512384.1-201ENST00000406683 331 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 ATP5G2P4-201ENST00000442175 420 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA2O43364 INE1-201ENST00000456273 945 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 SPDYE18-201ENST00000510091 1050 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.48■□□□□ 0.39
HOXA2O43364 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
HOXA2O43364 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA2O43364 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HOXA2O43364 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HOXA2O43364 CHCHD2P3-201ENST00000603038 451 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 AC074044.1-201ENST00000609673 707 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HOXA2O43364 AL109936.8-201ENST00000641772 604 ntBASIC17.48■□□□□ 0.39
HOXA2O43364 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HOXA2O43364 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA2O43364 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA2O43364 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA2O43364 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA2O43364 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HOXA2O43364 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXA2O43364 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
HOXA2O43364 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HOXA2O43364 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXA2O43364 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HOXA2O43364 U91328.1-201ENST00000437528 223 ntBASIC17.47■□□□□ 0.39
HOXA2O43364 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXA2O43364 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA2O43364 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXA2O43364 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA2O43364 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HOXA2O43364 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HOXA2O43364 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HOXA2O43364 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms