Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RIPK2O43353 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.76■□□□□ 0.27
RIPK2O43353 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.76■□□□□ 0.27
RIPK2O43353 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPK2O43353 AC020658.6-201ENST00000623564 1870 ntBASIC16.76■□□□□ 0.27
RIPK2O43353 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 AC006486.2-201ENST00000624246 2199 ntBASIC16.75■□□□□ 0.27
RIPK2O43353 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 SLC25A6P2-201ENST00000497974 877 ntBASIC16.75■□□□□ 0.27
RIPK2O43353 AC104819.1-201ENST00000504587 486 ntBASIC16.75■□□□□ 0.27
RIPK2O43353 FAM86EP-206ENST00000510506 987 ntBASIC16.75■□□□□ 0.27
RIPK2O43353 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 AL589182.2-201ENST00000619332 1049 ntBASIC16.75■□□□□ 0.27
RIPK2O43353 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
RIPK2O43353 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPK2O43353 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPK2O43353 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIPK2O43353 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.74■□□□□ 0.27
RIPK2O43353 AL353732.1-201ENST00000569618 1459 ntBASIC16.74■□□□□ 0.27
RIPK2O43353 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPK2O43353 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.74■□□□□ 0.27
RIPK2O43353 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RIPK2O43353 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.74■□□□□ 0.27
RIPK2O43353 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RIPK2O43353 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.74■□□□□ 0.27
RIPK2O43353 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPK2O43353 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.74■□□□□ 0.27
RIPK2O43353 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.74■□□□□ 0.27
RIPK2O43353 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RIPK2O43353 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RIPK2O43353 RN7SL850P-201ENST00000579959 291 ntBASIC16.74■□□□□ 0.27
RIPK2O43353 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPK2O43353 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPK2O43353 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RIPK2O43353 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.74■□□□□ 0.27
RIPK2O43353 AC116407.4-201ENST00000623319 1061 ntBASIC16.74■□□□□ 0.27
RIPK2O43353 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.74■□□□□ 0.27
RIPK2O43353 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RIPK2O43353 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.73■□□□□ 0.27
RIPK2O43353 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RIPK2O43353 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RIPK2O43353 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RIPK2O43353 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms