Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SOCS3O14543 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.44□□□□□ -0.42
SOCS3O14543 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SOCS3O14543 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SOCS3O14543 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SOCS3O14543 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.44□□□□□ -0.42
SOCS3O14543 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SOCS3O14543 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.44□□□□□ -0.42
SOCS3O14543 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.43□□□□□ -0.42
SOCS3O14543 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SOCS3O14543 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SOCS3O14543 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.43□□□□□ -0.42
SOCS3O14543 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
SOCS3O14543 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SOCS3O14543 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.43□□□□□ -0.42
SOCS3O14543 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SOCS3O14543 AC079776.4-201ENST00000511039 504 ntBASIC12.43□□□□□ -0.42
SOCS3O14543 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.43□□□□□ -0.42
SOCS3O14543 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.43□□□□□ -0.42
SOCS3O14543 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.43□□□□□ -0.42
SOCS3O14543 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.43□□□□□ -0.42
SOCS3O14543 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.43□□□□□ -0.42
SOCS3O14543 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.43□□□□□ -0.42
SOCS3O14543 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.43□□□□□ -0.42
SOCS3O14543 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.43□□□□□ -0.42
SOCS3O14543 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SOCS3O14543 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.43□□□□□ -0.42
SOCS3O14543 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.43□□□□□ -0.42
SOCS3O14543 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SOCS3O14543 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.42□□□□□ -0.42
SOCS3O14543 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 AL365203.3-201ENST00000609742 2057 ntBASIC12.42□□□□□ -0.42
SOCS3O14543 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SOCS3O14543 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 LINC02199-201ENST00000506655 2702 ntBASIC12.42□□□□□ -0.42
SOCS3O14543 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 AC109635.5-201ENST00000533593 962 ntBASIC12.42□□□□□ -0.42
SOCS3O14543 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.42□□□□□ -0.42
SOCS3O14543 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.42□□□□□ -0.42
SOCS3O14543 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.42□□□□□ -0.42
SOCS3O14543 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.42□□□□□ -0.42
SOCS3O14543 AC145285.3-201ENST00000564603 959 ntBASIC12.42□□□□□ -0.42
SOCS3O14543 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.42□□□□□ -0.42
SOCS3O14543 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.42□□□□□ -0.42
SOCS3O14543 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.42□□□□□ -0.42
SOCS3O14543 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.42□□□□□ -0.42
SOCS3O14543 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SOCS3O14543 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.42□□□□□ -0.42
SOCS3O14543 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SOCS3O14543 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms