Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SOX1O00570 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.29■□□□□ 0.36
SOX1O00570 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.29■□□□□ 0.36
SOX1O00570 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SOX1O00570 AC134915.1-201ENST00000426461 574 ntBASIC17.29■□□□□ 0.36
SOX1O00570 AL133466.1-201ENST00000447582 150 ntBASIC17.29■□□□□ 0.36
SOX1O00570 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.29■□□□□ 0.36
SOX1O00570 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
SOX1O00570 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.29■□□□□ 0.36
SOX1O00570 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.29■□□□□ 0.36
SOX1O00570 AL133499.1-201ENST00000596207 608 ntBASIC17.29■□□□□ 0.36
SOX1O00570 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.29■□□□□ 0.36
SOX1O00570 AC148477.9-201ENST00000623974 539 ntBASIC17.29■□□□□ 0.36
SOX1O00570 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.29■□□□□ 0.36
SOX1O00570 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.29■□□□□ 0.36
SOX1O00570 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.29■□□□□ 0.36
SOX1O00570 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.29■□□□□ 0.36
SOX1O00570 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SOX1O00570 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.29■□□□□ 0.36
SOX1O00570 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX1O00570 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX1O00570 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SOX1O00570 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SOX1O00570 INTS4P2-202ENST00000614726 2019 ntBASIC17.28■□□□□ 0.36
SOX1O00570 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SOX1O00570 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.28■□□□□ 0.36
SOX1O00570 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX1O00570 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.28■□□□□ 0.36
SOX1O00570 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX1O00570 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.28■□□□□ 0.36
SOX1O00570 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX1O00570 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX1O00570 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 MIR6756-201ENST00000616240 63 ntBASIC17.28■□□□□ 0.36
SOX1O00570 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SOX1O00570 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SOX1O00570 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SOX1O00570 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SOX1O00570 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX1O00570 AC098818.2-201ENST00000564925 2320 ntBASIC17.27■□□□□ 0.36
SOX1O00570 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SOX1O00570 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX1O00570 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX1O00570 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.27■□□□□ 0.36
SOX1O00570 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SOX1O00570 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.27■□□□□ 0.36
SOX1O00570 C2orf27AP3-201ENST00000434123 579 ntBASIC17.27■□□□□ 0.36
SOX1O00570 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 SPTLC1P5-201ENST00000450718 252 ntBASIC17.27■□□□□ 0.36
SOX1O00570 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.27■□□□□ 0.36
SOX1O00570 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX1O00570 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.27■□□□□ 0.36
SOX1O00570 AL354718.3-201ENST00000616414 581 ntBASIC17.27■□□□□ 0.36
SOX1O00570 CR382287.1-201ENST00000623954 586 ntBASIC17.27■□□□□ 0.36
SOX1O00570 AC005252.2-201ENST00000624630 1141 ntBASIC17.27■□□□□ 0.36
SOX1O00570 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX1O00570 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms