Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 AC145285.3-201ENST00000564603 959 ntBASIC16.18■□□□□ 0.18
CDC7O00311 MIR3909-201ENST00000579518 119 ntBASIC16.18■□□□□ 0.18
CDC7O00311 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.18■□□□□ 0.18
CDC7O00311 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.18■□□□□ 0.18
CDC7O00311 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.18■□□□□ 0.18
CDC7O00311 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.18■□□□□ 0.18
CDC7O00311 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDC7O00311 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDC7O00311 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDC7O00311 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDC7O00311 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC7O00311 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC7O00311 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC7O00311 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.17■□□□□ 0.18
CDC7O00311 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDC7O00311 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC7O00311 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.17■□□□□ 0.18
CDC7O00311 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 FDX1P1-201ENST00000449115 551 ntBASIC16.17■□□□□ 0.18
CDC7O00311 RPL13AP23-201ENST00000480739 586 ntBASIC16.17■□□□□ 0.18
CDC7O00311 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC7O00311 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC7O00311 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.17■□□□□ 0.18
CDC7O00311 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC7O00311 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC7O00311 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.17■□□□□ 0.18
CDC7O00311 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC7O00311 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC7O00311 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC7O00311 AC023141.13-201ENST00000604991 943 ntBASIC16.17■□□□□ 0.18
CDC7O00311 AC064836.3-201ENST00000607928 673 ntBASIC16.17■□□□□ 0.18
CDC7O00311 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.17■□□□□ 0.18
CDC7O00311 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.17■□□□□ 0.18
CDC7O00311 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.17■□□□□ 0.18
CDC7O00311 IL9RP2-201ENST00000423948 1312 ntBASIC16.17■□□□□ 0.18
CDC7O00311 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDC7O00311 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.16■□□□□ 0.18
CDC7O00311 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms