Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 AC008667.4-201ENST00000607370 168 ntBASIC15.47■□□□□ 0.07
CLCA1A8K7I4 AL805961.1-202ENST00000641562 540 ntBASIC15.47■□□□□ 0.07
CLCA1A8K7I4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCA1A8K7I4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TUBB8P12-201ENST00000308911 1335 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TUBB7P-202ENST00000428444 1305 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TUBB8P7-204ENST00000567960 1332 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 AC023824.1-201ENST00000562945 2975 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 PTCHD3P3-201ENST00000403073 906 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 AC108073.2-201ENST00000464002 357 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 RNA5SP416-201ENST00000516838 111 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 IGHV3-65-201ENST00000523210 341 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 MIR4751-201ENST00000578027 74 ntBASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCA1A8K7I4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CLCA1A8K7I4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CLCA1A8K7I4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CLCA1A8K7I4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCA1A8K7I4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCA1A8K7I4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCA1A8K7I4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 PGAM5P1-201ENST00000518923 814 ntBASIC15.45■□□□□ 0.06
CLCA1A8K7I4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 AC126177.1-201ENST00000547829 2218 ntBASIC15.45■□□□□ 0.06
CLCA1A8K7I4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCA1A8K7I4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms