Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC106820.2-201ENST00000563775 3264 ntBASIC14.36□□□□□ -0.11
MBD3L3A6NE82 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC005034.1-201ENST00000426657 489 ntBASIC14.36□□□□□ -0.11
MBD3L3A6NE82 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 MIR6069-201ENST00000620069 79 ntBASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AL035252.4-201ENST00000624174 288 ntBASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC025048.6-201ENST00000634326 1161 ntBASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 AC063926.2-201ENST00000623766 1308 ntBASIC14.36□□□□□ -0.11
MBD3L3A6NE82 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MBD3L3A6NE82 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 AC114501.2-201ENST00000439631 535 ntBASIC14.35□□□□□ -0.11
MBD3L3A6NE82 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 AP005018.1-201ENST00000525475 301 ntBASIC14.35□□□□□ -0.11
MBD3L3A6NE82 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 AC044860.1-202ENST00000559481 777 ntBASIC14.35□□□□□ -0.11
MBD3L3A6NE82 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MBD3L3A6NE82 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 AL353779.1-201ENST00000434793 351 ntBASIC14.34□□□□□ -0.11
MBD3L3A6NE82 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 AC245100.5-201ENST00000452108 331 ntBASIC14.34□□□□□ -0.11
MBD3L3A6NE82 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MBD3L3A6NE82 SDHAP3-202ENST00000515467 728 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms