Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 AC022145.2-201ENST00000598203 171 ntBASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 PCGF3-213ENST00000620529 1899 ntBASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 PCDHA1-201ENST00000378133 2726 ntBASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPDC1A2A3K4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 HMGA1P7-201ENST00000406908 502 ntBASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 TSEN15P1-201ENST00000423257 515 ntBASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AL671277.1-201ENST00000429656 993 ntBASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AC099522.2-201ENST00000607001 744 ntBASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AL513523.2-202ENST00000427283 2040 ntBASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPDC1A2A3K4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 AL355306.1-201ENST00000415580 579 ntBASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPDC1A2A3K4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms