Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00959A0A1B0GUT2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00959A0A1B0GUT2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 TSPY19P-201ENST00000418461 509 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 TSPY18P-201ENST00000441642 509 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 HCG4P8-203ENST00000443049 980 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 RPS15P9-201ENST00000494093 319 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AC107918.2-201ENST00000530817 355 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AC025062.2-201ENST00000605477 670 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AC010654.1-201ENST00000615722 808 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 REXO1L6P-202ENST00000619970 1078 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 HYMAI-201ENST00000635591 3347 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 AC010491.1-201ENST00000563101 2797 ntBASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00959A0A1B0GUT2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms