Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 AC002056.1-201ENST00000395613 760 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 BX842568.4-201ENST00000421222 227 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 AC092474.2-201ENST00000424288 719 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 AC112191.1-201ENST00000523689 701 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 AC021097.1-201ENST00000607902 574 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 C20orf181-201ENST00000623918 480 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 AL391005.1-201ENST00000623953 2435 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PPARGC1AQ9UBK2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PKD1P5-201ENST00000532415 10291 ntBASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPARGC1AQ9UBK2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 MKNK2P1-201ENST00000437526 628 ntBASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPARGC1AQ9UBK2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms