Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 AD001527.2-201ENST00000622994 785 ntBASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 TNRC18P2-201ENST00000417666 2714 ntBASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCM2LQ9NUG4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 ACTG1P4-201ENST00000425123 1122 ntBASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 AC005336.2-201ENST00000593183 939 ntBASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 AC148477.8-201ENST00000624298 468 ntBASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCM2LQ9NUG4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 CDC14C-201ENST00000428251 1719 ntBASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 AC097637.2-201ENST00000624096 1997 ntBASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.74■□□□□ 0.11
CCM2LQ9NUG4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 AL671710.1-201ENST00000610245 2349 ntBASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.73■□□□□ 0.11
CCM2LQ9NUG4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms