Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC142381.1-201ENST00000426099 345 ntBASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AC084121.4-201ENST00000641598 221 ntBASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 AF228730.8-201ENST00000642140 221 ntBASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.04■□□□□ 0.8
ECHDC1Q9NTX5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 IGHV3-62-201ENST00000520057 340 ntBASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 AP000842.3-202ENST00000569238 1080 ntBASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 AC134684.3-201ENST00000641758 218 ntBASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC1Q9NTX5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 MIR1233-2-201ENST00000408138 82 ntBASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 MIR1233-1-201ENST00000408722 82 ntBASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 AP006288.1-201ENST00000446065 395 ntBASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 AP000344.2-201ENST00000512987 629 ntBASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC1Q9NTX5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms