Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 AL391005.1-201ENST00000623953 2435 ntBASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM60Q9H2L4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 AL596087.1-201ENST00000400979 1969 ntBASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 ACTG1P14-201ENST00000446382 1122 ntBASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 TIMM8BP1-201ENST00000452384 211 ntBASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 PRYP6-201ENST00000514804 343 ntBASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 AC073389.1-201ENST00000595595 795 ntBASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 AC055717.3-201ENST00000622967 595 ntBASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 AL592424.1-201ENST00000563624 1536 ntBASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM60Q9H2L4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM60Q9H2L4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 AC026691.1-201ENST00000602502 2017 ntBASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 SPDYE11-202ENST00000450699 704 ntBASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 SPDYE9P-201ENST00000570642 692 ntBASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 AC027307.2-201ENST00000591252 911 ntBASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 SPDYE10P-202ENST00000612005 668 ntBASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 SPDYE8P-202ENST00000612377 668 ntBASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 AC105339.1-204ENST00000636249 355 ntBASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM60Q9H2L4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms