Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 AC010654.1-201ENST00000615722 808 ntBASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 AC116407.3-201ENST00000623905 1129 ntBASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 AC022188.1-201ENST00000620960 1664 ntBASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
UPF3BQ9BZI7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 IGLL3P-201ENST00000412472 434 ntBASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 AC092865.5-201ENST00000545435 363 ntBASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 AL603832.2-201ENST00000566195 2125 ntBASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF3BQ9BZI7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 LINC01144-201ENST00000626198 1710 ntBASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 HMGA1P7-201ENST00000406908 502 ntBASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPF3BQ9BZI7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 AC009947.1-201ENST00000444350 727 ntBASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 CXCL1P1-201ENST00000502804 216 ntBASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 KRT18P58-201ENST00000527480 1120 ntBASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 UNC93B6-202ENST00000528242 690 ntBASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms