Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 AC092658.1-201ENST00000505836 891 ntBASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 AC133552.6-201ENST00000613406 534 ntBASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 GGT3P-204ENST00000453783 1664 ntBASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 USP32P1-208ENST00000506594 1164 ntBASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 MIR6775-201ENST00000617557 69 ntBASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 AC007613.1-201ENST00000572811 2597 ntBASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH11XQ9BZA7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 EEF1DP4-201ENST00000446006 880 ntBASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 CROCCP4-201ENST00000457096 498 ntBASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH11XQ9BZA7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 ANKRD19P-201ENST00000338192 862 ntBASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 LINC01115-203ENST00000606068 577 ntBASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 AL158212.4-201ENST00000624062 1286 ntBASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 AC018470.1-201ENST00000624790 3129 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms