Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 KRTAP4-2-201ENST00000377726 763 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC234772.1-201ENST00000377927 937 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 MIR606-201ENST00000384851 96 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC006455.2-201ENST00000429931 906 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC078875.1-201ENST00000431907 724 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 MTATP6P30-201ENST00000443540 664 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC239859.2-201ENST00000444165 318 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC01598-202ENST00000445151 719 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 TPT1P7-201ENST00000458300 517 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 LGI1-204ENST00000478763 600 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 MTCYBP18-201ENST00000501056 747 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 LECT2-203ENST00000512872 762 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 BTF3P13-201ENST00000513224 490 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC091114.1-202ENST00000521991 785 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC01169-201ENST00000558797 833 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AGGF1P9-201ENST00000561884 913 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AL049597.2-201ENST00000565575 961 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC073091.2-201ENST00000603205 907 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AL592504.1-201ENST00000605319 439 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 7SK.10-201ENST00000621414 298 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AL117332.1-201ENST00000622628 974 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AL359757.1-201ENST00000623176 255 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC241377.3-202ENST00000626088 1088 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC241585.3-202ENST00000628937 1088 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 AC245100.8-202ENST00000629247 1058 ntBASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 CNR1-205ENST00000468898 1320 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP3-3Q9BYR6 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 LIAS-203ENST00000381846 1578 ntTSL 3 BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP3-3Q9BYR6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 ZSWIM2-201ENST00000295131 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 FEM1AP1-201ENST00000431297 1995 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 FCRLA-207ENST00000367950 823 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 MT-TL1-201ENST00000386347 75 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 DLG2-206ENST00000398304 783 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 MTCO3P31-201ENST00000405526 789 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 RN7SKP150-201ENST00000410516 321 ntBASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP3-3Q9BYR6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms