Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.22■□□□□ 0.35
SMOQ99835 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMOQ99835 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.21■□□□□ 0.35
SMOQ99835 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.21■□□□□ 0.35
SMOQ99835 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.21■□□□□ 0.35
SMOQ99835 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMOQ99835 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.21■□□□□ 0.35
SMOQ99835 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SMOQ99835 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.21■□□□□ 0.35
SMOQ99835 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.21■□□□□ 0.35
SMOQ99835 KLF2P3-201ENST00000451977 1087 ntBASIC17.21■□□□□ 0.35
SMOQ99835 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.21■□□□□ 0.35
SMOQ99835 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.21■□□□□ 0.35
SMOQ99835 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.21■□□□□ 0.35
SMOQ99835 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMOQ99835 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SMOQ99835 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMOQ99835 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMOQ99835 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SMOQ99835 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.21■□□□□ 0.34
SMOQ99835 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMOQ99835 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 REXO1L8P-201ENST00000604378 1897 ntBASIC17.2■□□□□ 0.34
SMOQ99835 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.2■□□□□ 0.34
SMOQ99835 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SMOQ99835 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SMOQ99835 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.2■□□□□ 0.34
SMOQ99835 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.2■□□□□ 0.34
SMOQ99835 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.2■□□□□ 0.34
SMOQ99835 AC125807.1-201ENST00000483097 614 ntBASIC17.2■□□□□ 0.34
SMOQ99835 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
SMOQ99835 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.2■□□□□ 0.34
SMOQ99835 BANF1P1-201ENST00000553684 263 ntBASIC17.2■□□□□ 0.34
SMOQ99835 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.2■□□□□ 0.34
SMOQ99835 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.2■□□□□ 0.34
SMOQ99835 AC007967.4-201ENST00000614700 386 ntBASIC17.2■□□□□ 0.34
SMOQ99835 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.2■□□□□ 0.34
SMOQ99835 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SMOQ99835 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.2■□□□□ 0.34
SMOQ99835 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SMOQ99835 AL592424.1-201ENST00000563624 1536 ntBASIC17.2■□□□□ 0.34
SMOQ99835 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 AC079328.2-201ENST00000561241 3354 ntBASIC17.2■□□□□ 0.34
SMOQ99835 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMOQ99835 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.2■□□□□ 0.34
SMOQ99835 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.2■□□□□ 0.34
SMOQ99835 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.19■□□□□ 0.34
SMOQ99835 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.19■□□□□ 0.34
SMOQ99835 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SMOQ99835 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.19■□□□□ 0.34
SMOQ99835 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.19■□□□□ 0.34
SMOQ99835 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms