Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 CU639417.3-201ENST00000624240 1404 ntBASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SYNGAP1Q96PV0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 OR8S1-201ENST00000310194 1080 ntBASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 AL645728.1-201ENST00000366221 2101 ntBASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 MEIS3P1-201ENST00000495167 958 ntBASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 AL079307.3-201ENST00000556114 283 ntBASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 TP53TG3HP-202ENST00000569755 579 ntBASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGAP1Q96PV0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYNGAP1Q96PV0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SYNGAP1Q96PV0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYNGAP1Q96PV0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGAP1Q96PV0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 BTBD7P1-201ENST00000447253 1453 ntBASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGAP1Q96PV0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms