Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 MYCLP2-201ENST00000449268 967 ntBASIC20.21■□□□□ 0.83
NLRP3Q96P20 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 AC099568.2-201ENST00000609194 695 ntBASIC20.21■□□□□ 0.83
NLRP3Q96P20 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 AL603756.1-201ENST00000606511 2163 ntBASIC20.21■□□□□ 0.83
NLRP3Q96P20 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NLRP3Q96P20 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLRP3Q96P20 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 PCGF3-213ENST00000620529 1899 ntBASIC20.2■□□□□ 0.82
NLRP3Q96P20 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 AL589987.1-201ENST00000453380 819 ntBASIC20.2■□□□□ 0.82
NLRP3Q96P20 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 AC017083.2-201ENST00000608069 979 ntBASIC20.2■□□□□ 0.82
NLRP3Q96P20 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NLRP3Q96P20 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NLRP3Q96P20 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 AC106886.1-201ENST00000568660 600 ntBASIC20.19■□□□□ 0.82
NLRP3Q96P20 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NLRP3Q96P20 AC005622.1-201ENST00000636801 1703 ntBASIC20.19■□□□□ 0.82
NLRP3Q96P20 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NLRP3Q96P20 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRP3Q96P20 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRP3Q96P20 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRP3Q96P20 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRP3Q96P20 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRP3Q96P20 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NLRP3Q96P20 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.18■□□□□ 0.82
NLRP3Q96P20 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms