Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 KRT18P34-201ENST00000488218 1270 ntBASIC17.27■□□□□ 0.36
RNF34Q969K3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF34Q969K3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF34Q969K3 FAM86C2P-203ENST00000528684 1004 ntBASIC17.27■□□□□ 0.36
RNF34Q969K3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RNF34Q969K3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF34Q969K3 RARRES2P8-201ENST00000566335 367 ntBASIC17.27■□□□□ 0.36
RNF34Q969K3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF34Q969K3 AC139530.3-201ENST00000620344 690 ntBASIC17.27■□□□□ 0.36
RNF34Q969K3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF34Q969K3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF34Q969K3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF34Q969K3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF34Q969K3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF34Q969K3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RNF34Q969K3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RNF34Q969K3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF34Q969K3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF34Q969K3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF34Q969K3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF34Q969K3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RNF34Q969K3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF34Q969K3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF34Q969K3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC016027.1-202ENST00000607927 1699 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF34Q969K3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC211486.1-202ENST00000416371 468 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC211476.1-201ENST00000503899 468 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF34Q969K3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
RNF34Q969K3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC099522.2-201ENST00000607001 744 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF34Q969K3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 AC079781.4-201ENST00000641908 219 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 WASH6P-202ENST00000359512 1437 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF34Q969K3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF34Q969K3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 PCDHA14-201ENST00000506751 2298 ntBASIC17.26■□□□□ 0.35
RNF34Q969K3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF34Q969K3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF34Q969K3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF34Q969K3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF34Q969K3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF34Q969K3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 AL355306.1-201ENST00000415580 579 ntBASIC17.25■□□□□ 0.35
RNF34Q969K3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF34Q969K3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 SPDYE11-202ENST00000450699 704 ntBASIC17.25■□□□□ 0.35
RNF34Q969K3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF34Q969K3 TIMM8BP1-201ENST00000452384 211 ntBASIC17.25■□□□□ 0.35
RNF34Q969K3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
RNF34Q969K3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF34Q969K3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF34Q969K3 SPDYE9P-201ENST00000570642 692 ntBASIC17.25■□□□□ 0.35
RNF34Q969K3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms