Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 AC060834.1-201ENST00000443027 2032 ntBASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 AC112492.5-201ENST00000421897 457 ntBASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 ELK1P1-201ENST00000485699 580 ntBASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 KRT17P8-201ENST00000540749 863 ntBASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 CTBP2P3-201ENST00000585629 1255 ntBASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RAPGEF4Q8WZA2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 MIR1909-201ENST00000411312 80 ntBASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 TTTY23B-201ENST00000442790 549 ntBASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 RAB43P1-201ENST00000561790 589 ntBASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 AC006538.1-201ENST00000567905 1585 ntBASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAPGEF4Q8WZA2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 AL603756.1-201ENST00000606511 2163 ntBASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 PCGF3-213ENST00000620529 1899 ntBASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 AC093726.1-201ENST00000608064 963 ntBASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 MIR6805-201ENST00000615055 62 ntBASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RAPGEF4Q8WZA2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms