Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 AF238378.1-201ENST00000526806 358 ntBASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 SART3-203ENST00000546611 1184 ntBASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 AL139011.1-202ENST00000642063 584 ntBASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTN4IP1Q8WWV3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 UNC93B7-201ENST00000509439 705 ntBASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 MTDHP4-201ENST00000600287 670 ntBASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AL589182.2-201ENST00000619332 1049 ntBASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 DBET-201ENST00000630918 3363 ntBASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AL603832.2-201ENST00000566195 2125 ntBASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTN4IP1Q8WWV3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 MST1L-201ENST00000442552 2185 ntBASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.93□□□□□ -0.18
RTN4IP1Q8WWV3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms