Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 MRPL3P1-201ENST00000400109 1033 ntBASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 FAM185BP-201ENST00000443595 716 ntBASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 AL513523.2-202ENST00000427283 2040 ntBASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAF3IP1Q8TDR0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CRYGEP-201ENST00000412192 528 ntBASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 MIR4515-201ENST00000584082 81 ntBASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 ACTL9-202ENST00000612068 1252 ntBASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 AC008741.2-201ENST00000612792 3115 ntBASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF3IP1Q8TDR0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms