Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.14■□□□□ 0.82
RTL9Q8NET4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTL9Q8NET4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.14■□□□□ 0.82
RTL9Q8NET4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RTL9Q8NET4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTL9Q8NET4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RTL9Q8NET4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RTL9Q8NET4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTL9Q8NET4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.14■□□□□ 0.82
RTL9Q8NET4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 ARSEP1-201ENST00000420443 635 ntBASIC20.14■□□□□ 0.81
RTL9Q8NET4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 AL139010.1-201ENST00000454878 894 ntBASIC20.14■□□□□ 0.81
RTL9Q8NET4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 AC104794.3-201ENST00000566840 1248 ntBASIC20.14■□□□□ 0.81
RTL9Q8NET4 TP53TG3HP-202ENST00000569755 579 ntBASIC20.14■□□□□ 0.81
RTL9Q8NET4 AL132655.2-201ENST00000596276 594 ntBASIC20.14■□□□□ 0.81
RTL9Q8NET4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 AL033527.5-202ENST00000641632 1098 ntBASIC20.14■□□□□ 0.81
RTL9Q8NET4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL9Q8NET4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.14■□□□□ 0.81
RTL9Q8NET4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 HLA-V-201ENST00000429037 534 ntBASIC20.13■□□□□ 0.81
RTL9Q8NET4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 AC135586.1-201ENST00000539323 574 ntBASIC20.13■□□□□ 0.81
RTL9Q8NET4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTL9Q8NET4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 U82695.1-201ENST00000635752 1889 ntBASIC20.13■□□□□ 0.81
RTL9Q8NET4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL9Q8NET4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.12■□□□□ 0.81
RTL9Q8NET4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms