Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 FAM220BP-201ENST00000377689 816 ntBASIC12.89□□□□□ -0.35
C3orf56Q8N813 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 ZNF890P-202ENST00000530367 1156 ntBASIC12.89□□□□□ -0.35
C3orf56Q8N813 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 MIR4538-201ENST00000581377 78 ntBASIC12.89□□□□□ -0.35
C3orf56Q8N813 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 MIR6775-201ENST00000617557 69 ntBASIC12.89□□□□□ -0.35
C3orf56Q8N813 GPR182-203ENST00000622922 591 ntBASIC12.89□□□□□ -0.35
C3orf56Q8N813 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.89□□□□□ -0.35
C3orf56Q8N813 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C3orf56Q8N813 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 AL513477.1-201ENST00000602865 2407 ntBASIC12.88□□□□□ -0.35
C3orf56Q8N813 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 AC123567.1-201ENST00000548294 1261 ntBASIC12.88□□□□□ -0.35
C3orf56Q8N813 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 TMEM261P1-201ENST00000604899 340 ntBASIC12.88□□□□□ -0.35
C3orf56Q8N813 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 MIR6787-201ENST00000616675 61 ntBASIC12.88□□□□□ -0.35
C3orf56Q8N813 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 CROCCP3-202ENST00000420820 1947 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms