Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 AC002056.1-201ENST00000395613 760 ntBASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 AL671277.1-201ENST00000429656 993 ntBASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 AC006277.1-201ENST00000624348 1610 ntBASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 SPCS2P1-201ENST00000561636 679 ntBASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC33Q8N5R6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 ADH5P3-201ENST00000433842 1137 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 AC005237.2-201ENST00000434368 219 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 KRT8P48-201ENST00000515599 1220 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 AC093520.2-201ENST00000561830 333 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 MPDU1-223ENST00000582151 728 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms