Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 MIR3909-201ENST00000579518 119 ntBASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AF228730.6-201ENST00000641497 218 ntBASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AC084121.3-201ENST00000641716 218 ntBASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AC105233.6-201ENST00000642093 218 ntBASIC17.91■□□□□ 0.46
VPS52Q8N1B4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS52Q8N1B4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AL118508.1-201ENST00000613502 2345 ntBASIC17.9■□□□□ 0.46
VPS52Q8N1B4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AC016027.1-202ENST00000607927 1699 ntBASIC17.9■□□□□ 0.46
VPS52Q8N1B4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AC093525.9-201ENST00000624961 1746 ntBASIC17.9■□□□□ 0.46
VPS52Q8N1B4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 MIR346-201ENST00000362234 95 ntBASIC17.9■□□□□ 0.46
VPS52Q8N1B4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AL512638.1-201ENST00000457493 794 ntBASIC17.9■□□□□ 0.46
VPS52Q8N1B4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AL158211.3-201ENST00000607385 239 ntBASIC17.9■□□□□ 0.46
VPS52Q8N1B4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AC116353.5-201ENST00000638148 1699 ntBASIC17.9■□□□□ 0.46
VPS52Q8N1B4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS52Q8N1B4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
VPS52Q8N1B4 AC131009.4-201ENST00000624048 1740 ntBASIC17.89■□□□□ 0.46
VPS52Q8N1B4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 AC097493.3-201ENST00000509725 367 ntBASIC17.89■□□□□ 0.45
VPS52Q8N1B4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 MPDU1-223ENST00000582151 728 ntBASIC17.89■□□□□ 0.45
VPS52Q8N1B4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS52Q8N1B4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VPS52Q8N1B4 AC244107.1-201ENST00000442033 332 ntBASIC17.88■□□□□ 0.45
VPS52Q8N1B4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms