Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 AC129492.6-201ENST00000611383 1305 ntBASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 MTDHP4-201ENST00000600287 670 ntBASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 AL355877.3-201ENST00000622820 899 ntBASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC170Q8IYT3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 AC016027.1-202ENST00000607927 1699 ntBASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC170Q8IYT3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC170Q8IYT3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC170Q8IYT3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC170Q8IYT3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC170Q8IYT3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC170Q8IYT3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CCDC170Q8IYT3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC170Q8IYT3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms