Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 ACA64.2-201ENST00000459014 129 ntBASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AC022494.1-201ENST00000466044 728 ntBASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AL162274.1-201ENST00000617191 1098 ntBASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 AL023806.1-201ENST00000603994 1649 ntBASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEFF1Q8IYR6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 KRT8P39-201ENST00000396270 1433 ntBASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 MIR1909-201ENST00000411312 80 ntBASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 AC013467.2-201ENST00000605472 835 ntBASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEFF1Q8IYR6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEFF1Q8IYR6 MIR658-201ENST00000385210 100 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms