Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AC091804.1-201ENST00000486888 567 ntBASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AL603756.1-201ENST00000606511 2163 ntBASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AL008638.5-201ENST00000623814 1298 ntBASIC22.94■■□□□ 1.26
UBR1Q8IWV7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 AC093433.1-201ENST00000458048 571 ntBASIC22.93■■□□□ 1.26
UBR1Q8IWV7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 AC000095.1-201ENST00000603208 874 ntBASIC22.93■■□□□ 1.26
UBR1Q8IWV7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC22.93■■□□□ 1.26
UBR1Q8IWV7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC22.93■■□□□ 1.26
UBR1Q8IWV7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AC004987.2-201ENST00000395959 1148 ntBASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC22.92■■□□□ 1.26
UBR1Q8IWV7 AL691432.1-201ENST00000596308 1422 ntBASIC22.92■■□□□ 1.26
UBR1Q8IWV7 REXO1L8P-201ENST00000604378 1897 ntBASIC22.91■■□□□ 1.26
UBR1Q8IWV7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 AC107373.2-201ENST00000607735 490 ntBASIC22.91■■□□□ 1.26
UBR1Q8IWV7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC22.91■■□□□ 1.26
UBR1Q8IWV7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms