Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 RN7SL837P-201ENST00000463010 287 ntBASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 ELK1P1-201ENST00000485699 580 ntBASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 AC074044.1-201ENST00000609673 707 ntBASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NPAS4Q8IUM7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 PCGF3-213ENST00000620529 1899 ntBASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS4Q8IUM7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 TTTY23B-201ENST00000442790 549 ntBASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 KRT17P8-201ENST00000540749 863 ntBASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 RRP7BP-205ENST00000566851 833 ntBASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 AL603756.1-201ENST00000606511 2163 ntBASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 AL365330.1-201ENST00000607459 531 ntBASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 MIR6805-201ENST00000615055 62 ntBASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPAS4Q8IUM7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 FO393414.2-201ENST00000405153 598 ntBASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 MIR1909-201ENST00000411312 80 ntBASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 AC112492.5-201ENST00000421897 457 ntBASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 RAB43P1-201ENST00000561790 589 ntBASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 CTBP2P3-201ENST00000585629 1255 ntBASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS4Q8IUM7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms