Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 SLC22A20-204ENST00000530038 1673 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 AL353732.1-201ENST00000569618 1459 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 KRT18P56-201ENST00000507275 550 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 CYP2A7P1-201ENST00000595391 815 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 AP001350.2-201ENST00000625104 1094 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 MTHFR-217ENST00000641820 1569 ntBASIC16.89■□□□□ 0.29
CASC4Q6P4E1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 GGT4P-201ENST00000623672 1708 ntBASIC16.88■□□□□ 0.29
CASC4Q6P4E1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 RNPS1P1-201ENST00000507437 918 ntBASIC16.88■□□□□ 0.29
CASC4Q6P4E1 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 HYMAI-201ENST00000635591 3347 ntBASIC16.88■□□□□ 0.29
CASC4Q6P4E1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CASC4Q6P4E1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.87■□□□□ 0.29
CASC4Q6P4E1 AC107918.2-201ENST00000530817 355 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms