Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AC078925.2-201ENST00000624013 1973 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 EEF1DP4-201ENST00000446006 880 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 ENPP7P5-201ENST00000541031 1031 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 REXO1L8P-201ENST00000604378 1897 ntBASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 MIR326-201ENST00000362220 95 ntBASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 AC141586.5-201ENST00000624546 2050 ntBASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13DQ5THJ4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 ACTG1P3-201ENST00000431775 1114 ntBASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AL049840.4-201ENST00000602422 811 ntBASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AL021578.1-201ENST00000613646 709 ntBASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 NOC2LP2-201ENST00000407594 1944 ntBASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms