Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 TERF1P1-201ENST00000311003 1181 ntBASIC12.5□□□□□ -0.41
LINC01559Q495D7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 TSPY22P-201ENST00000427496 604 ntBASIC12.5□□□□□ -0.41
LINC01559Q495D7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 SPDYE13P-201ENST00000445314 798 ntBASIC12.5□□□□□ -0.41
LINC01559Q495D7 AC098826.2-201ENST00000452011 651 ntBASIC12.5□□□□□ -0.41
LINC01559Q495D7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 KRT8P49-201ENST00000604166 1432 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AP002414.1-201ENST00000391405 1147 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AL645929.1-201ENST00000420084 975 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 NUS1P1-201ENST00000446295 882 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 NOC2LP1-201ENST00000450578 752 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 NUCKS1P1-201ENST00000452067 703 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 INGX-202ENST00000489074 768 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AC068408.1-201ENST00000577406 1144 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 IGHV3-41-201ENST00000613121 348 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 AC069503.1-202ENST00000616576 642 ntBASIC12.49□□□□□ -0.41
LINC01559Q495D7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01559Q495D7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01559Q495D7 AL596087.1-201ENST00000400979 1969 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms