Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 MIR6069-201ENST00000620069 79 ntBASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 AC060834.1-201ENST00000443027 2032 ntBASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM71Q2Q1W2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM71Q2Q1W2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM71Q2Q1W2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM71Q2Q1W2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM71Q2Q1W2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM71Q2Q1W2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TRIM71Q2Q1W2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 MYCLP2-201ENST00000449268 967 ntBASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM71Q2Q1W2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 MIR1909-201ENST00000411312 80 ntBASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 MEP1AP4-201ENST00000423244 1087 ntBASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 AC006538.1-201ENST00000567905 1585 ntBASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM71Q2Q1W2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 AL603756.1-201ENST00000606511 2163 ntBASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM71Q2Q1W2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms