Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SKOR1P84550 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 AF186996.4-201ENST00000467186 377 ntBASIC17.37■□□□□ 0.37
SKOR1P84550 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.37■□□□□ 0.37
SKOR1P84550 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.37■□□□□ 0.37
SKOR1P84550 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SKOR1P84550 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.37■□□□□ 0.37
SKOR1P84550 AC243591.1-201ENST00000452967 1364 ntBASIC17.37■□□□□ 0.37
SKOR1P84550 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SKOR1P84550 AC006504.4-201ENST00000592118 1568 ntBASIC17.36■□□□□ 0.37
SKOR1P84550 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 AC013268.4-201ENST00000637413 2228 ntBASIC17.36■□□□□ 0.37
SKOR1P84550 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.36■□□□□ 0.37
SKOR1P84550 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SKOR1P84550 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.36■□□□□ 0.37
SKOR1P84550 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.36■□□□□ 0.37
SKOR1P84550 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.36■□□□□ 0.37
SKOR1P84550 ELK2BP-201ENST00000415014 1224 ntBASIC17.36■□□□□ 0.37
SKOR1P84550 KRT18P27-201ENST00000427733 1299 ntBASIC17.36■□□□□ 0.37
SKOR1P84550 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.36■□□□□ 0.37
SKOR1P84550 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.36■□□□□ 0.37
SKOR1P84550 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SKOR1P84550 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.36■□□□□ 0.37
SKOR1P84550 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.36■□□□□ 0.37
SKOR1P84550 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
SKOR1P84550 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.36■□□□□ 0.37
SKOR1P84550 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 AC073347.1-201ENST00000421633 2643 ntBASIC17.36■□□□□ 0.37
SKOR1P84550 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SKOR1P84550 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SKOR1P84550 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.35■□□□□ 0.37
SKOR1P84550 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.35■□□□□ 0.37
SKOR1P84550 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.35■□□□□ 0.37
SKOR1P84550 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SKOR1P84550 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SKOR1P84550 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.35■□□□□ 0.37
SKOR1P84550 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.35■□□□□ 0.37
SKOR1P84550 AP002490.2-201ENST00000524791 560 ntBASIC17.35■□□□□ 0.37
SKOR1P84550 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.35■□□□□ 0.37
SKOR1P84550 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.35■□□□□ 0.37
SKOR1P84550 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SKOR1P84550 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.35■□□□□ 0.37
SKOR1P84550 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SKOR1P84550 AC006557.2-201ENST00000592985 1240 ntBASIC17.35■□□□□ 0.37
SKOR1P84550 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.35■□□□□ 0.37
SKOR1P84550 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
SKOR1P84550 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms