Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ACTBP60709 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ACTBP60709 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ACTBP60709 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ACTBP60709 AC132938.5-201ENST00000624980 1813 ntBASIC14.25□□□□□ -0.13
ACTBP60709 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 AL136379.1-201ENST00000623471 2642 ntBASIC14.24□□□□□ -0.13
ACTBP60709 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.24□□□□□ -0.13
ACTBP60709 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.24□□□□□ -0.13
ACTBP60709 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 AL353801.3-201ENST00000609898 542 ntBASIC14.24□□□□□ -0.13
ACTBP60709 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ACTBP60709 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.24□□□□□ -0.13
ACTBP60709 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.24□□□□□ -0.13
ACTBP60709 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
ACTBP60709 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ACTBP60709 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 AP002414.1-201ENST00000391405 1147 ntBASIC14.23□□□□□ -0.13
ACTBP60709 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 AC246785.2-201ENST00000432512 513 ntBASIC14.23□□□□□ -0.13
ACTBP60709 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 AC069148.1-201ENST00000608741 768 ntBASIC14.23□□□□□ -0.13
ACTBP60709 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.23□□□□□ -0.13
ACTBP60709 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ACTBP60709 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
ACTBP60709 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ACTBP60709 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms