Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AL031055.1-201ENST00000606362 631 ntBASIC15.4■□□□□ 0.06
PSMD4P55036 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.4■□□□□ 0.06
PSMD4P55036 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PSMD4P55036 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 GGT3P-204ENST00000453783 1664 ntBASIC15.4■□□□□ 0.06
PSMD4P55036 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PSMD4P55036 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.4■□□□□ 0.06
PSMD4P55036 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PSMD4P55036 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.4■□□□□ 0.06
PSMD4P55036 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
PSMD4P55036 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PSMD4P55036 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.39■□□□□ 0.05
PSMD4P55036 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PSMD4P55036 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.39■□□□□ 0.05
PSMD4P55036 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.39■□□□□ 0.05
PSMD4P55036 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PSMD4P55036 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.39■□□□□ 0.05
PSMD4P55036 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.39■□□□□ 0.05
PSMD4P55036 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.39■□□□□ 0.05
PSMD4P55036 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.39■□□□□ 0.05
PSMD4P55036 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.39■□□□□ 0.05
PSMD4P55036 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.39■□□□□ 0.05
PSMD4P55036 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
PSMD4P55036 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.39■□□□□ 0.05
PSMD4P55036 AC020765.3-201ENST00000613051 740 ntBASIC15.39■□□□□ 0.05
PSMD4P55036 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.39■□□□□ 0.05
PSMD4P55036 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PSMD4P55036 AC025580.3-201ENST00000617932 1424 ntBASIC15.39■□□□□ 0.05
PSMD4P55036 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PSMD4P55036 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PSMD4P55036 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.39■□□□□ 0.05
PSMD4P55036 AL512652.2-201ENST00000625156 1716 ntBASIC15.39■□□□□ 0.05
PSMD4P55036 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PSMD4P55036 AC018695.7-201ENST00000624587 2492 ntBASIC15.39■□□□□ 0.05
PSMD4P55036 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.39■□□□□ 0.05
PSMD4P55036 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PSMD4P55036 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PSMD4P55036 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
PSMD4P55036 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PSMD4P55036 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PSMD4P55036 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.38■□□□□ 0.05
PSMD4P55036 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.38■□□□□ 0.05
PSMD4P55036 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.38■□□□□ 0.05
PSMD4P55036 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.38■□□□□ 0.05
PSMD4P55036 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.38■□□□□ 0.05
PSMD4P55036 KRT19P2-202ENST00000557173 1012 ntBASIC15.38■□□□□ 0.05
PSMD4P55036 AC040169.1-201ENST00000565382 521 ntBASIC15.38■□□□□ 0.05
PSMD4P55036 AC018845.2-201ENST00000568326 409 ntBASIC15.38■□□□□ 0.05
PSMD4P55036 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.38■□□□□ 0.05
PSMD4P55036 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
PSMD4P55036 UBALD1-205ENST00000590891 2641 ntBASIC15.38■□□□□ 0.05
PSMD4P55036 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PSMD4P55036 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.38■□□□□ 0.05
PSMD4P55036 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PSMD4P55036 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PSMD4P55036 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PSMD4P55036 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PSMD4P55036 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PSMD4P55036 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PSMD4P55036 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PSMD4P55036 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PSMD4P55036 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms