Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CTBP2P3-201ENST00000585629 1255 ntBASIC18.88■□□□□ 0.61
HMGCS2P54868 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCS2P54868 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HMGCS2P54868 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS2P54868 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS2P54868 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HMGCS2P54868 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCS2P54868 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.88■□□□□ 0.61
HMGCS2P54868 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMGCS2P54868 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.87■□□□□ 0.61
HMGCS2P54868 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMGCS2P54868 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMGCS2P54868 AC098850.1-201ENST00000419919 790 ntBASIC18.87■□□□□ 0.61
HMGCS2P54868 AC112492.5-201ENST00000421897 457 ntBASIC18.87■□□□□ 0.61
HMGCS2P54868 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 ELK1P1-201ENST00000485699 580 ntBASIC18.87■□□□□ 0.61
HMGCS2P54868 AC123567.1-201ENST00000548294 1261 ntBASIC18.87■□□□□ 0.61
HMGCS2P54868 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HMGCS2P54868 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HMGCS2P54868 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGCS2P54868 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HMGCS2P54868 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS2P54868 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS2P54868 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS2P54868 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS2P54868 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
HMGCS2P54868 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS2P54868 AC006538.1-201ENST00000567905 1585 ntBASIC18.86■□□□□ 0.61
HMGCS2P54868 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS2P54868 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCS2P54868 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS2P54868 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HMGCS2P54868 MIR1909-201ENST00000411312 80 ntBASIC18.86■□□□□ 0.61
HMGCS2P54868 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS2P54868 MEP1AP4-201ENST00000423244 1087 ntBASIC18.86■□□□□ 0.61
HMGCS2P54868 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.86■□□□□ 0.61
HMGCS2P54868 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGCS2P54868 KRT17P8-201ENST00000540749 863 ntBASIC18.86■□□□□ 0.61
HMGCS2P54868 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.86■□□□□ 0.61
HMGCS2P54868 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGCS2P54868 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
HMGCS2P54868 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HMGCS2P54868 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 PCGF3-213ENST00000620529 1899 ntBASIC18.86■□□□□ 0.61
HMGCS2P54868 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS2P54868 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
HMGCS2P54868 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HMGCS2P54868 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCS2P54868 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCS2P54868 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms