Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.52■□□□□ 0.08
SMSP52788 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.52■□□□□ 0.08
SMSP52788 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.52■□□□□ 0.08
SMSP52788 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.52■□□□□ 0.08
SMSP52788 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.52■□□□□ 0.08
SMSP52788 AC011467.4-201ENST00000594891 528 ntBASIC15.52■□□□□ 0.08
SMSP52788 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.52■□□□□ 0.08
SMSP52788 AL078644.1-201ENST00000609881 752 ntBASIC15.52■□□□□ 0.08
SMSP52788 AC010654.1-201ENST00000615722 808 ntBASIC15.52■□□□□ 0.08
SMSP52788 AC004790.2-201ENST00000623588 572 ntBASIC15.52■□□□□ 0.08
SMSP52788 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SMSP52788 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.52■□□□□ 0.07
SMSP52788 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
SMSP52788 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
SMSP52788 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.52■□□□□ 0.07
SMSP52788 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SMSP52788 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.52■□□□□ 0.07
SMSP52788 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SMSP52788 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 AL645728.1-201ENST00000366221 2101 ntBASIC15.51■□□□□ 0.07
SMSP52788 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SMSP52788 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 ACTG1P14-201ENST00000446382 1122 ntBASIC15.51■□□□□ 0.07
SMSP52788 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.51■□□□□ 0.07
SMSP52788 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 GGTLC5P-201ENST00000617623 998 ntBASIC15.51■□□□□ 0.07
SMSP52788 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SMSP52788 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SMSP52788 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SMSP52788 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.51■□□□□ 0.07
SMSP52788 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.5■□□□□ 0.07
SMSP52788 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.5■□□□□ 0.07
SMSP52788 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.5■□□□□ 0.07
SMSP52788 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SMSP52788 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SMSP52788 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.5■□□□□ 0.07
SMSP52788 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SMSP52788 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.5■□□□□ 0.07
SMSP52788 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.5■□□□□ 0.07
SMSP52788 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.5■□□□□ 0.07
SMSP52788 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SMSP52788 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.5■□□□□ 0.07
SMSP52788 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.5■□□□□ 0.07
SMSP52788 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.5■□□□□ 0.07
SMSP52788 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.5■□□□□ 0.07
SMSP52788 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SMSP52788 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms