Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN3P51790 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.04■□□□□ 0.48
CLCN3P51790 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN3P51790 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN3P51790 AC061975.2-201ENST00000581722 295 ntBASIC18.04■□□□□ 0.48
CLCN3P51790 AL133215.2-201ENST00000609242 977 ntBASIC18.04■□□□□ 0.48
CLCN3P51790 TEX28P1-201ENST00000613479 1221 ntBASIC18.04■□□□□ 0.48
CLCN3P51790 TEX28P2-201ENST00000617764 1221 ntBASIC18.04■□□□□ 0.48
CLCN3P51790 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLCN3P51790 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.04■□□□□ 0.48
CLCN3P51790 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.04■□□□□ 0.48
CLCN3P51790 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN3P51790 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN3P51790 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CLCN3P51790 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN3P51790 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN3P51790 CETN4P-206ENST00000642099 2168 ntBASIC18.04■□□□□ 0.48
CLCN3P51790 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN3P51790 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.04■□□□□ 0.48
CLCN3P51790 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN3P51790 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN3P51790 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLCN3P51790 AC005622.1-201ENST00000636801 1703 ntBASIC18.03■□□□□ 0.48
CLCN3P51790 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN3P51790 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN3P51790 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN3P51790 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLCN3P51790 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CLCN3P51790 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CLCN3P51790 RPL37AP1-201ENST00000412502 279 ntBASIC18.03■□□□□ 0.48
CLCN3P51790 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN3P51790 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.03■□□□□ 0.48
CLCN3P51790 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN3P51790 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN3P51790 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.03■□□□□ 0.48
CLCN3P51790 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN3P51790 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.03■□□□□ 0.48
CLCN3P51790 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN3P51790 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CLCN3P51790 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN3P51790 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLCN3P51790 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLCN3P51790 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CLCN3P51790 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN3P51790 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN3P51790 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN3P51790 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLCN3P51790 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CLCN3P51790 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCN3P51790 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN3P51790 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN3P51790 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLCN3P51790 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLCN3P51790 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN3P51790 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN3P51790 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.02■□□□□ 0.48
CLCN3P51790 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN3P51790 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN3P51790 COX20P2-201ENST00000452636 358 ntBASIC18.02■□□□□ 0.48
CLCN3P51790 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCN3P51790 TERF1P3-201ENST00000505638 1227 ntBASIC18.02■□□□□ 0.48
CLCN3P51790 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN3P51790 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.02■□□□□ 0.48
CLCN3P51790 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN3P51790 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN3P51790 LINC02560-201ENST00000596379 459 ntBASIC18.02■□□□□ 0.48
CLCN3P51790 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.02■□□□□ 0.48
CLCN3P51790 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN3P51790 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLCN3P51790 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CLCN3P51790 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN3P51790 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CLCN3P51790 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN3P51790 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms