Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RAB5CP51148 AC092338.2-201ENST00000568827 1415 ntBASIC13.31□□□□□ -0.28
RAB5CP51148 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5CP51148 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB5CP51148 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RAB5CP51148 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5CP51148 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5CP51148 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 AC092666.2-201ENST00000613287 246 ntBASIC13.31□□□□□ -0.28
RAB5CP51148 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 AL731571.1-201ENST00000617058 5428 ntBASIC13.31□□□□□ -0.28
RAB5CP51148 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB5CP51148 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB5CP51148 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 CICP24-201ENST00000605464 2705 ntBASIC13.31□□□□□ -0.28
RAB5CP51148 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5CP51148 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.31□□□□□ -0.28
RAB5CP51148 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5CP51148 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RAB5CP51148 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 AC079781.5-202ENST00000641784 3743 ntBASIC13.3□□□□□ -0.28
RAB5CP51148 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB5CP51148 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RAB5CP51148 ESRRAP1-201ENST00000400596 1257 ntBASIC13.3□□□□□ -0.28
RAB5CP51148 FAM197Y1-201ENST00000421178 764 ntBASIC13.3□□□□□ -0.28
RAB5CP51148 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.3□□□□□ -0.28
RAB5CP51148 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB5CP51148 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB5CP51148 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB5CP51148 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB5CP51148 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 AC004263.2-201ENST00000617183 678 ntBASIC13.3□□□□□ -0.28
RAB5CP51148 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 AC006277.1-201ENST00000624348 1610 ntBASIC13.3□□□□□ -0.28
RAB5CP51148 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5CP51148 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB5CP51148 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5CP51148 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB5CP51148 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms