Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.48■□□□□ 0.55
TM4SF4P48230 AC004898.1-201ENST00000451057 766 ntBASIC18.48■□□□□ 0.55
TM4SF4P48230 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.48■□□□□ 0.55
TM4SF4P48230 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF4P48230 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF4P48230 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.48■□□□□ 0.55
TM4SF4P48230 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF4P48230 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF4P48230 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF4P48230 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.48■□□□□ 0.55
TM4SF4P48230 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.48■□□□□ 0.55
TM4SF4P48230 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF4P48230 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TM4SF4P48230 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF4P48230 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TM4SF4P48230 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF4P48230 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF4P48230 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF4P48230 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF4P48230 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TM4SF4P48230 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
TM4SF4P48230 ACKR1-201ENST00000368121 1240 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 AC004987.2-201ENST00000395959 1148 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 AZGP1P1-201ENST00000411909 902 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 BTBD6P1-201ENST00000412176 1267 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.47■□□□□ 0.55
TM4SF4P48230 C2orf27AP3-201ENST00000434123 579 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 TARDBPP1-201ENST00000442013 1203 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 AC005077.2-201ENST00000449786 690 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 Z93015.1-201ENST00000451718 390 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 BX284668.4-201ENST00000453917 508 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.47■□□□□ 0.55
TM4SF4P48230 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 SCARNA20.5-201ENST00000516991 142 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.47■□□□□ 0.55
TM4SF4P48230 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.47■□□□□ 0.55
TM4SF4P48230 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 AL354718.3-201ENST00000616414 581 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.47■□□□□ 0.55
TM4SF4P48230 CR382287.1-201ENST00000623954 586 ntBASIC18.47■□□□□ 0.55
TM4SF4P48230 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TM4SF4P48230 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF4P48230 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.46■□□□□ 0.55
TM4SF4P48230 AC006001.1-201ENST00000325130 474 ntBASIC18.46■□□□□ 0.55
TM4SF4P48230 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.46■□□□□ 0.55
TM4SF4P48230 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF4P48230 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF4P48230 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.46■□□□□ 0.55
TM4SF4P48230 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF4P48230 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.46■□□□□ 0.55
TM4SF4P48230 UPF3AP2-201ENST00000457924 1132 ntBASIC18.46■□□□□ 0.55
TM4SF4P48230 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.46■□□□□ 0.55
TM4SF4P48230 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF4P48230 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF4P48230 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.46■□□□□ 0.55
TM4SF4P48230 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TM4SF4P48230 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
TM4SF4P48230 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF4P48230 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
TM4SF4P48230 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.46■□□□□ 0.54
TM4SF4P48230 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM4SF4P48230 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms