Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC061975.2-201ENST00000581722 295 ntBASIC17.47■□□□□ 0.39
BRCC3P46736 TEX28P1-201ENST00000613479 1221 ntBASIC17.47■□□□□ 0.39
BRCC3P46736 TEX28P2-201ENST00000617764 1221 ntBASIC17.47■□□□□ 0.39
BRCC3P46736 AC008761.3-201ENST00000624803 892 ntBASIC17.47■□□□□ 0.39
BRCC3P46736 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
BRCC3P46736 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
BRCC3P46736 CETN4P-206ENST00000642099 2168 ntBASIC17.47■□□□□ 0.39
BRCC3P46736 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRCC3P46736 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRCC3P46736 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
BRCC3P46736 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.47■□□□□ 0.39
BRCC3P46736 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRCC3P46736 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.47■□□□□ 0.39
BRCC3P46736 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
BRCC3P46736 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
BRCC3P46736 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
BRCC3P46736 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
BRCC3P46736 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
BRCC3P46736 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
BRCC3P46736 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCC3P46736 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCC3P46736 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.46■□□□□ 0.39
BRCC3P46736 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.46■□□□□ 0.39
BRCC3P46736 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.46■□□□□ 0.39
BRCC3P46736 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCC3P46736 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.46■□□□□ 0.39
BRCC3P46736 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.46■□□□□ 0.39
BRCC3P46736 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
BRCC3P46736 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.46■□□□□ 0.39
BRCC3P46736 TERF1P3-201ENST00000505638 1227 ntBASIC17.46■□□□□ 0.39
BRCC3P46736 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCC3P46736 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.46■□□□□ 0.39
BRCC3P46736 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
BRCC3P46736 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCC3P46736 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.46■□□□□ 0.39
BRCC3P46736 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 AC005622.1-201ENST00000636801 1703 ntBASIC17.46■□□□□ 0.39
BRCC3P46736 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRCC3P46736 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BRCC3P46736 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.46■□□□□ 0.38
BRCC3P46736 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BRCC3P46736 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.46■□□□□ 0.38
BRCC3P46736 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
BRCC3P46736 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.45■□□□□ 0.38
BRCC3P46736 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 AC092171.3-201ENST00000610122 2651 ntBASIC17.45■□□□□ 0.38
BRCC3P46736 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.45■□□□□ 0.38
BRCC3P46736 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.45■□□□□ 0.38
BRCC3P46736 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.45■□□□□ 0.38
BRCC3P46736 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BRCC3P46736 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
BRCC3P46736 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BRCC3P46736 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BRCC3P46736 SERBP1P5-201ENST00000510079 1181 ntBASIC17.45■□□□□ 0.38
BRCC3P46736 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BRCC3P46736 AC024267.1-201ENST00000582320 895 ntBASIC17.45■□□□□ 0.38
BRCC3P46736 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.45■□□□□ 0.38
BRCC3P46736 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.45■□□□□ 0.38
BRCC3P46736 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
BRCC3P46736 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.45■□□□□ 0.38
BRCC3P46736 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRCC3P46736 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.45■□□□□ 0.38
BRCC3P46736 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms