Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
CHRNA4P43681 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA4P43681 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA4P43681 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CHRNA4P43681 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA4P43681 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA4P43681 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA4P43681 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA4P43681 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.63■□□□□ 0.25
CHRNA4P43681 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA4P43681 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.63■□□□□ 0.25
CHRNA4P43681 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.63■□□□□ 0.25
CHRNA4P43681 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA4P43681 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA4P43681 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA4P43681 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.63■□□□□ 0.25
CHRNA4P43681 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA4P43681 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA4P43681 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA4P43681 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA4P43681 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA4P43681 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA4P43681 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA4P43681 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 FAM58CP-201ENST00000435741 640 ntBASIC16.62■□□□□ 0.25
CHRNA4P43681 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA4P43681 AC002347.1-201ENST00000569543 541 ntBASIC16.62■□□□□ 0.25
CHRNA4P43681 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 MTHFR-217ENST00000641820 1569 ntBASIC16.62■□□□□ 0.25
CHRNA4P43681 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA4P43681 PMS2P7-201ENST00000506558 1336 ntBASIC16.62■□□□□ 0.25
CHRNA4P43681 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHRNA4P43681 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 AL596087.1-201ENST00000400979 1969 ntBASIC16.62■□□□□ 0.25
CHRNA4P43681 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA4P43681 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA4P43681 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA4P43681 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA4P43681 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 AC006449.6-201ENST00000612330 2296 ntBASIC16.61■□□□□ 0.25
CHRNA4P43681 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA4P43681 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA4P43681 AC002056.1-201ENST00000395613 760 ntBASIC16.61■□□□□ 0.25
CHRNA4P43681 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRNA4P43681 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA4P43681 POU5F1P6-201ENST00000466990 990 ntBASIC16.61■□□□□ 0.25
CHRNA4P43681 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRNA4P43681 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms