Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.61■□□□□ 0.57
PRPHP41219 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPHP41219 AP000347.1-202ENST00000435868 847 ntBASIC18.61■□□□□ 0.57
PRPHP41219 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.61■□□□□ 0.57
PRPHP41219 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPHP41219 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPHP41219 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PRPHP41219 U82695.1-201ENST00000635752 1889 ntBASIC18.6■□□□□ 0.57
PRPHP41219 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 AKAP8P1-201ENST00000434743 1349 ntBASIC18.6■□□□□ 0.57
PRPHP41219 PMS2P7-201ENST00000506558 1336 ntBASIC18.6■□□□□ 0.57
PRPHP41219 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PRPHP41219 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.6■□□□□ 0.57
PRPHP41219 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.6■□□□□ 0.57
PRPHP41219 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 RARRES2P8-201ENST00000566335 367 ntBASIC18.6■□□□□ 0.57
PRPHP41219 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 AL513523.2-202ENST00000427283 2040 ntBASIC18.6■□□□□ 0.57
PRPHP41219 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 AL513477.1-201ENST00000602865 2407 ntBASIC18.6■□□□□ 0.57
PRPHP41219 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRPHP41219 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PRPHP41219 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.6■□□□□ 0.57
PRPHP41219 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.59■□□□□ 0.57
PRPHP41219 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 AL596087.1-201ENST00000400979 1969 ntBASIC18.59■□□□□ 0.57
PRPHP41219 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PRPHP41219 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.59■□□□□ 0.57
PRPHP41219 ADH5P3-201ENST00000433842 1137 ntBASIC18.59■□□□□ 0.57
PRPHP41219 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.59■□□□□ 0.57
PRPHP41219 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PRPHP41219 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.59■□□□□ 0.57
PRPHP41219 AC092902.6-201ENST00000641783 218 ntBASIC18.59■□□□□ 0.57
PRPHP41219 AC073439.1-201ENST00000624121 1774 ntBASIC18.59■□□□□ 0.57
PRPHP41219 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.59■□□□□ 0.57
PRPHP41219 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PRPHP41219 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRPHP41219 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRPHP41219 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms