Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN7P35236 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN7P35236 RHOQP3-201ENST00000437982 621 ntBASIC17.04■□□□□ 0.32
PTPN7P35236 UNC93B6-202ENST00000528242 690 ntBASIC17.04■□□□□ 0.32
PTPN7P35236 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN7P35236 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN7P35236 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN7P35236 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN7P35236 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN7P35236 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPN7P35236 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 AP005117.1-202ENST00000581724 1908 ntBASIC17.04■□□□□ 0.32
PTPN7P35236 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
PTPN7P35236 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN7P35236 AC092919.2-201ENST00000623631 1645 ntBASIC17.03■□□□□ 0.32
PTPN7P35236 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PTPN7P35236 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN7P35236 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PTPN7P35236 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN7P35236 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN7P35236 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN7P35236 IGHV3-22-201ENST00000520721 359 ntBASIC17.03■□□□□ 0.32
PTPN7P35236 AC096734.2-201ENST00000562054 433 ntBASIC17.03■□□□□ 0.32
PTPN7P35236 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN7P35236 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN7P35236 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTPN7P35236 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
PTPN7P35236 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN7P35236 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN7P35236 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN7P35236 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PTPN7P35236 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN7P35236 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
PTPN7P35236 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN7P35236 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN7P35236 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 AL450487.1-201ENST00000426799 995 ntBASIC17.02■□□□□ 0.32
PTPN7P35236 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTPN7P35236 AC093724.1-201ENST00000448659 1027 ntBASIC17.02■□□□□ 0.32
PTPN7P35236 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN7P35236 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN7P35236 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PTPN7P35236 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN7P35236 AC116407.3-201ENST00000623905 1129 ntBASIC17.02■□□□□ 0.32
PTPN7P35236 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTPN7P35236 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN7P35236 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN7P35236 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.02■□□□□ 0.31
PTPN7P35236 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN7P35236 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN7P35236 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.02■□□□□ 0.31
PTPN7P35236 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN7P35236 AC008677.1-201ENST00000519230 1561 ntBASIC17.02■□□□□ 0.31
PTPN7P35236 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN7P35236 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PTPN7P35236 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.02■□□□□ 0.31
PTPN7P35236 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.02■□□□□ 0.31
PTPN7P35236 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.02■□□□□ 0.31
PTPN7P35236 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms