Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LSP1P33241 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LSP1P33241 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
LSP1P33241 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.61■□□□□ 0.25
LSP1P33241 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
LSP1P33241 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LSP1P33241 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LSP1P33241 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LSP1P33241 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.6■□□□□ 0.25
LSP1P33241 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LSP1P33241 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 AC003669.1-201ENST00000334569 611 ntBASIC16.6■□□□□ 0.25
LSP1P33241 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
LSP1P33241 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.6■□□□□ 0.25
LSP1P33241 HLA-F-220ENST00000434407 884 ntBASIC16.6■□□□□ 0.25
LSP1P33241 RASA4DP-201ENST00000460726 1199 ntBASIC16.6■□□□□ 0.25
LSP1P33241 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.6■□□□□ 0.25
LSP1P33241 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.6■□□□□ 0.25
LSP1P33241 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LSP1P33241 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.6■□□□□ 0.25
LSP1P33241 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
LSP1P33241 AC132938.5-201ENST00000624980 1813 ntBASIC16.6■□□□□ 0.25
LSP1P33241 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LSP1P33241 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.6■□□□□ 0.25
LSP1P33241 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LSP1P33241 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.6■□□□□ 0.25
LSP1P33241 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSP1P33241 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
LSP1P33241 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.6■□□□□ 0.25
LSP1P33241 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LSP1P33241 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LSP1P33241 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 PCGF3-213ENST00000620529 1899 ntBASIC16.59■□□□□ 0.25
LSP1P33241 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.59■□□□□ 0.25
LSP1P33241 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LSP1P33241 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.59■□□□□ 0.25
LSP1P33241 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LSP1P33241 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.59■□□□□ 0.25
LSP1P33241 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.59■□□□□ 0.25
LSP1P33241 GCSHP2-201ENST00000560971 527 ntBASIC16.59■□□□□ 0.25
LSP1P33241 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 AP000525.1-201ENST00000608286 694 ntBASIC16.59■□□□□ 0.25
LSP1P33241 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.59■□□□□ 0.25
LSP1P33241 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LSP1P33241 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.59■□□□□ 0.25
LSP1P33241 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
LSP1P33241 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.59■□□□□ 0.25
LSP1P33241 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.59■□□□□ 0.25
LSP1P33241 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.59■□□□□ 0.25
LSP1P33241 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms