Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXA11P31270 ALOX12P2-203ENST00000570921 1945 ntBASIC17.69■□□□□ 0.42
HOXA11P31270 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HOXA11P31270 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXA11P31270 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXA11P31270 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.69■□□□□ 0.42
HOXA11P31270 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.69■□□□□ 0.42
HOXA11P31270 AC010336.2-201ENST00000564226 506 ntBASIC17.69■□□□□ 0.42
HOXA11P31270 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.69■□□□□ 0.42
HOXA11P31270 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.69■□□□□ 0.42
HOXA11P31270 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.69■□□□□ 0.42
HOXA11P31270 AC026979.3-201ENST00000607315 403 ntBASIC17.69■□□□□ 0.42
HOXA11P31270 AL365330.1-201ENST00000607459 531 ntBASIC17.69■□□□□ 0.42
HOXA11P31270 AC009118.2-201ENST00000613275 655 ntBASIC17.69■□□□□ 0.42
HOXA11P31270 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXA11P31270 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HOXA11P31270 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXA11P31270 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HOXA11P31270 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXA11P31270 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXA11P31270 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXA11P31270 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HOXA11P31270 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.68■□□□□ 0.42
HOXA11P31270 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.68■□□□□ 0.42
HOXA11P31270 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXA11P31270 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HOXA11P31270 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 AL139010.1-201ENST00000454878 894 ntBASIC17.68■□□□□ 0.42
HOXA11P31270 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HOXA11P31270 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXA11P31270 AF228730.6-201ENST00000641497 218 ntBASIC17.68■□□□□ 0.42
HOXA11P31270 AC084121.3-201ENST00000641716 218 ntBASIC17.68■□□□□ 0.42
HOXA11P31270 AC105233.6-201ENST00000642093 218 ntBASIC17.68■□□□□ 0.42
HOXA11P31270 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HOXA11P31270 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXA11P31270 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HOXA11P31270 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXA11P31270 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXA11P31270 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXA11P31270 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HOXA11P31270 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.67■□□□□ 0.42
HOXA11P31270 AL592424.1-201ENST00000563624 1536 ntBASIC17.67■□□□□ 0.42
HOXA11P31270 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 AL136982.4-201ENST00000437689 1740 ntBASIC17.67■□□□□ 0.42
HOXA11P31270 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA11P31270 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA11P31270 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXA11P31270 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.67■□□□□ 0.42
HOXA11P31270 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
HOXA11P31270 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA11P31270 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA11P31270 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA11P31270 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXA11P31270 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXA11P31270 AD000864.1-201ENST00000624076 2295 ntBASIC17.67■□□□□ 0.42
HOXA11P31270 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXA11P31270 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXA11P31270 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HOXA11P31270 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 AC009053.2-201ENST00000563701 2365 ntBASIC17.66■□□□□ 0.42
HOXA11P31270 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXA11P31270 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA11P31270 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms