Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL3L1P16619 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL3L1P16619 RARRES2P8-201ENST00000566335 367 ntBASIC13.62□□□□□ -0.23
CCL3L1P16619 MIR4469-201ENST00000583919 79 ntBASIC13.62□□□□□ -0.23
CCL3L1P16619 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL3L1P16619 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL3L1P16619 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL3L1P16619 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CCL3L1P16619 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 PCDHB19P-201ENST00000570871 2371 ntBASIC13.62□□□□□ -0.23
CCL3L1P16619 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL3L1P16619 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL3L1P16619 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL3L1P16619 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL3L1P16619 ME2P1-201ENST00000426028 1970 ntBASIC13.62□□□□□ -0.23
CCL3L1P16619 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CCL3L1P16619 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL3L1P16619 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCL3L1P16619 AL135744.1-201ENST00000565098 629 ntBASIC13.61□□□□□ -0.23
CCL3L1P16619 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL3L1P16619 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCL3L1P16619 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCL3L1P16619 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CCL3L1P16619 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL3L1P16619 FER1L4-210ENST00000615531 5998 ntBASIC13.61□□□□□ -0.23
CCL3L1P16619 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL3L1P16619 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL3L1P16619 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 ELL2P1-201ENST00000413990 1906 ntBASIC13.6□□□□□ -0.23
CCL3L1P16619 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCL3L1P16619 AC124067.4-201ENST00000519691 2379 ntBASIC13.6□□□□□ -0.23
CCL3L1P16619 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL3L1P16619 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CCL3L1P16619 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL3L1P16619 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCL3L1P16619 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.6□□□□□ -0.23
CCL3L1P16619 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.6□□□□□ -0.23
CCL3L1P16619 TFAMP1-201ENST00000412727 736 ntBASIC13.6□□□□□ -0.23
CCL3L1P16619 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL3L1P16619 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 ADH5P3-201ENST00000433842 1137 ntBASIC13.6□□□□□ -0.23
CCL3L1P16619 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL3L1P16619 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL3L1P16619 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL3L1P16619 TIMM8BP1-201ENST00000452384 211 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms